ISBI

Automatic multi-atlas-based cartilage segmentation from knee MR images

In this paper, we propose a multi-atlas-based method to automatically segment the femoral and tibial cartilage from T1 weighted magnetic resonance (MR) knee images. The segmentation result is a joint decision of the spatial priors from a multi-atlas …

Deformable image registration of sliding organs using anisotropic diffusive regularization

Traditional deformable image registration imposes a uniform smoothness constraint on the deformation field. This is not appropriate when registering images visualizing organs that slide relative to each other, and therefore leads to registration …

Automatic three-label bone segmentation from knee MR images

We propose a novel fully automatic three-label bone segmentation approach applied to knee segmentation (femur and tibia) from T1 and T2* magnetic resonance (MR) images. The three-label segmentation approach guarantees separate segmentations of femur …

Physically-based deformable image registration with material property and boundary condition estimation

We propose a new deformable medical image registration method that uses a physically-based simulator and an iterative optimizer to estimate the simulation parameters determining the deformation field between the two images. Although a …

A Method for Normalizing Histology Slides for Quantitative Analysis

Inconsistencies in the preparation of histology slides make it difficult to perform quantitative analysis on their results. In this paper we provide two mechanisms for overcoming many of the known inconsistencies in the staining process, thereby …

Statistical Shape Analysis of Brain Structures Using Spherical Wavelets

We present a novel method of statistical surface-based morphometry based on the use of non-parametric permutation tests and a spherical wavelet (SWC) shape representation. As an application, we analyze two brain structures, the caudate nucleus and …