registration

Fluid Registration Between Lung CT and Stationary Chest Tomosynthesis Images

Registration is widely used in image-guided therapy and image-guided surgery to estimate spatial correspondences between organs of interest between planning and treatment images. However, while high-quality computed tomography (CT) images are often …

Registration of Images with Pathologies

Registration is one of the fundamental tasks in medical image analysis. It is an essential step for many applications to establish spatial correspondences between two images. However, image registration in the presence of pathologies is challenging …

Votenet+: An Improved Deep Learning Label Fusion Method for Multi-Atlas Segmentation

In this work, we improve the performance of multi-atlas segmentation (MAS) by integrating the recently proposed VoteNet model with the joint label fusion (JLF) approach. Specifically, we first illustrate that using a deep convolutional neural network …

DeepAtlas: Joint Semi-supervised Learning of Image Registration and Segmentation

Deep convolutional neural networks (CNNs) are state-of-theart for semantic image segmentation, but typically require many labeled training samples. Obtaining 3D segmentations of medical images for supervised training is difficult and labor intensive. …

Fast predictive simple geodesic regression

Deformable image registration and regression are important tasks in medical image analysis. However, they are computationally expensive, especially when analyzing large-scale datasets that contain thousands of images. Hence, cluster computing is …

Metric Learning for Image Registration

Image registration is a key technique in medical image analysis to estimate deformations between image pairs. A good deformation model is important for high-quality estimates. However, most existing approaches use ad-hoc deformation models chosen for …

Networks for Joint Affine and Non-Parametric Image Registration

We introduce an end-to-end deep-learning framework for 3D medical image registration. In contrast to existing approaches, our framework combines two registration methods: an affine registration and a vector momentum-parameterized stationary velocity …

Region-specific Diffeomorphic Metric Mapping

We introduce a region-specific diffeomorphic metric mapping (RDMM) registration approach. RDMM is non-parametric, estimating spatio-temporal velocity fields which parameterize the sought-for spatial transformation. Regularization of these velocity …

Exploratory Population Analysis with Unbalanced Optimal Transport

The plethora of data from neuroimaging studies provide a rich opportunity to discover effects and generate hypotheses through exploratory data analysis. Brain pathologies often manifest in changes in shape along with deterioration and alteration of …

Patient-Specific Registration of Pre-operative and Post-recurrence Brain Tumor MRI Scans

Registering brain magnetic resonance imaging (MRI) scans containing pathologies is challenging primarily due to large deformations caused by the pathologies, leading to missing correspondences between scans. However, the registration task is …