Publications

(2020). Perfusion Imaging: A Data Assimilation Approach. Preprint.

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(2020). PIANO: Perfusion Imaging via Advection-diffusion. Medical Image Computing and Computer Assisted Intervention - MICCAI.

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(2020). Votenet+: An Improved Deep Learning Label Fusion Method for Multi-Atlas Segmentation. 17th IEEE International Symposium on Biomedical Imaging, ISBI 2020, Iowa City, IA, USA, April 3-7, 2020.

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(2020). Topologically Densified Distributions. CoRR.

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(2020). Spatial Component Analysis to Mitigate Multiple Testing in Voxel-Based Analysis. Medical Image Computing and Computer Assisted Intervention - MICCAI.

(2020). Fluid registration between lung CT and stationary chest tomosynthesis images. Medical Image Computing and Computer Assisted Intervention - MICCAI.

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(2020). Deep Message Passing on Sets. The Thirty-Fourth AAAI Conference on Artificial Intelligence, AAAI 2020, The Thirty-Second Innovative Applications of Artificial Intelligence Conference, IAAI 2020, The Tenth AAAI Symposium on Educational Advances in Artificial Intelligence, EAAI 2020, New York, NY, USA, February 7-12, 2020.

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(2020). Deep Goal-Oriented Clustering. CoRR.

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(2020). Anatomical Data Augmentation via Fluid-based Image Registration. Medical Image Computing and Computer Assisted Intervention - MICCAI.

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(2020). Adversarial Data Augmentation via Deformation Statistics. Computer Vision - ECCV 2020 - 16th European Conference.

(2020). A Shooting Formulation of Deep Learning. CoRR.

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(2019). VoteNet: A Deep Learning Label Fusion Method for Multi-atlas Segmentation. Medical Image Computing and Computer Assisted Intervention - MICCAI 2019 - 22nd International Conference, Shenzhen, China, October 13-17, 2019, Proceedings, Part III.

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(2019). Stochastic block models with multiple continuous attributes. Applied Network Science.

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(2019). Region-specific Diffeomorphic Metric Mapping. Advances in Neural Information Processing Systems 32: Annual Conference on Neural Information Processing Systems 2019, NeurIPS 2019, 8-14 December 2019, Vancouver, BC, Canada.

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(2019). Networks for Joint Affine and Non-Parametric Image Registration. IEEE Conference on Computer Vision and Pattern Recognition, CVPR 2019, Long Beach, CA, USA, June 16-20, 2019.

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(2019). Multiseg pipeline: automatic tissue segmentation of brain MR images with subject-specific atlases. Medical Imaging 2019: Biomedical Applications in Molecular, Structural, and Functional Imaging, San Diego, California, United States, 16-21 February 2019.

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(2019). Metric Learning for Image Registration. IEEE Conference on Computer Vision and Pattern Recognition, CVPR 2019, Long Beach, CA, USA, June 16-20, 2019.

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(2019). Learning Representations of Persistence Barcodes. J. Mach. Learn. Res..

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(2019). Image-Based Methods for Phase Estimation, Gating, and Temporal Superresolution of Cardiac Ultrasound. IEEE Trans. Biomed. Engineering.

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(2019). Graph Filtration Learning. CoRR.

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(2019). Fast predictive simple geodesic regression. Medical Image Anal..

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(2019). DeepAtlas: Joint Semi-supervised Learning of Image Registration and Segmentation. Medical Image Computing and Computer Assisted Intervention - MICCAI 2019 - 22nd International Conference, Shenzhen, China, October 13-17, 2019, Proceedings, Part II.

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(2019). Deep Multi-View Learning via Task-Optimal CCA. CoRR.

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(2019). Connectivity-Optimized Representation Learning via Persistent Homology. Proceedings of the 36th International Conference on Machine Learning, ICML 2019, 9-15 June 2019, Long Beach, California, USA.

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(2018). Testing Alignment of Node Attributes with Network Structure Through Label Propagation. CoRR.

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(2018). Stochastic Block Models with Multiple Continuous Attributes. CoRR.

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(2018). Scoliosis screening and monitoring using self contained ultrasound and neural networks. 15th IEEE International Symposium on Biomedical Imaging, ISBI 2018, Washington, DC, USA, April 4-7, 2018.

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(2018). Patient-Specific Registration of Pre-operative and Post-recurrence Brain Tumor MRI Scans. Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries - 4th International Workshop, BrainLes 2018, Held in Conjunction with MICCAI 2018, Granada, Spain, September 16, 2018, Revised Selected Papers, Part I.

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(2018). Multiple Instance Learning for Heterogeneous Images: Training a CNN for Histopathology. Medical Image Computing and Computer Assisted Intervention - MICCAI 2018 - 21st International Conference, Granada, Spain, September 16-20, 2018, Proceedings, Part II.

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(2018). Image analysis with deep learning to predict breast cancer grade, ER status, histologic subtype, and intrinsic subtype. NPJ breast cancer.

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(2018). Exploratory Population Analysis with Unbalanced Optimal Transport. Medical Image Computing and Computer Assisted Intervention - MICCAI 2018 - 21st International Conference, Granada, Spain, September 16-20, 2018, Proceedings, Part III.

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(2018). Contextual Additive Networks to Efficiently Boost 3D Image Segmentations. Deep Learning in Medical Image Analysis - and - Multimodal Learning for Clinical Decision Support - 4th International Workshop, DLMIA 2018, and 8th International Workshop, ML-CDS 2018, Held in Conjunction with MICCAI 2018, Granada, Spain, September 20, 2018, Proceedings.

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(2018). Brain extraction from normal and pathological images: A joint PCA/Image-Reconstruction approach. NeuroImage.

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(2018). Automatic Multi-Atlas Segmentation for Abdominal Images Using Template Construction and Robust Principal Component Analysis. 24th International Conference on Pattern Recognition, ICPR 2018, Beijing, China, August 20-24, 2018.

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(2017). The UNC-Wisconsin Rhesus Macaque Neurodevelopment Database: A Structural MRI and DTI Database of Early Postnatal Development. Frontiers in Neuroscience.

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(2017). Regression Uncertainty on the Grassmannian. Proceedings of the 20th International Conference on Artificial Intelligence and Statistics, AISTATS 2017, 20-22 April 2017, Fort Lauderdale, FL, USA.

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(2017). Quicksilver: Fast predictive image registration - A deep learning approach. NeuroImage.

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(2017). Probabilistic Diffeomorphic Registration: Representing Uncertainty. CoRR.

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(2017). Orthotropic Thin Shell Elasticity Estimation for Surface Registration. Information Processing in Medical Imaging - 25th International Conference, IPMI 2017, Boone, NC, USA, June 25-30, 2017, Proceedings.

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(2017). Multidimensional classification of hippocampal shape features discriminates Alzheimer's disease and mild cognitive impairment from normal aging. CoRR.

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(2017). Information Processing in Medical Imaging - 25th International Conference, IPMI 2017, Boone, NC, USA, June 25-30, 2017, Proceedings. Springer.

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(2017). Fast Predictive Simple Geodesic Regression. Deep Learning in Medical Image Analysis and Multimodal Learning for Clinical Decision Support - Third International Workshop, DLMIA 2017, and 7th International Workshop, ML-CDS 2017, Held in Conjunction with MICCAI 2017, Québec City, QC, Canada, September 14, 2017, Proceedings.

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(2017). Fast predictive multimodal image registration. 14th IEEE International Symposium on Biomedical Imaging, ISBI 2017, Melbourne, Australia, April 18-21, 2017.

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(2017). Efficient registration of pathological images: A joint PCA/image-reconstruction approach. 14th IEEE International Symposium on Biomedical Imaging, ISBI 2017, Melbourne, Australia, April 18-21, 2017.

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(2017). Deep Learning with Topological Signatures. Advances in Neural Information Processing Systems 30: Annual Conference on Neural Information Processing Systems 2017, 4-9 December 2017, Long Beach, CA, USA.

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(2017). Constructing Shape Spaces from a Topological Perspective. Information Processing in Medical Imaging - 25th International Conference, IPMI 2017, Boone, NC, USA, June 25-30, 2017, Proceedings.

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(2017). Compressing networks with super nodes. CoRR.

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(2017). AGA: Attribute-Guided Augmentation. 2017 IEEE Conference on Computer Vision and Pattern Recognition, CVPR 2017, Honolulu, HI, USA, July 21-26, 2017.

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(2017). Active Mean Fields for Probabilistic Image Segmentation: Connections with Chan-Vese and Rudin-Osher-Fatemi Models. SIAM J. Imaging Sciences.

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(2016). Ultrasound spectroscopy. 13th IEEE International Symposium on Biomedical Imaging, ISBI 2016, Prague, Czech Republic, April 13-16, 2016.

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(2016). The Endoscopogram: A 3D Model Reconstructed from Endoscopic Video Frames. Medical Image Computing and Computer-Assisted Intervention - MICCAI 2016 - 19th International Conference, Athens, Greece, October 17-21, 2016, Proceedings, Part I.

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(2016). Registration of Pathological Images. Simulation and Synthesis in Medical Imaging - First International Workshop, SASHIMI 2016, Held in Conjunction with MICCAI 2016, Athens, Greece, October 21, 2016, Proceedings.

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(2016). Registration of Developmental Image Sequences with Missing Data. 2016 IEEE Conference on Computer Vision and Pattern Recognition Workshops, CVPR Workshops 2016, Las Vegas, NV, USA, June 26 - July 1, 2016.

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(2016). Parametric Regression on the Grassmannian. IEEE Trans. Pattern Anal. Mach. Intell..

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(2016). One-Shot Learning of Scene Locations via Feature Trajectory Transfer. 2016 IEEE Conference on Computer Vision and Pattern Recognition, CVPR 2016, Las Vegas, NV, USA, June 27-30, 2016.

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(2016). Memory Efficient LDDMM for Lung CT. Medical Image Computing and Computer-Assisted Intervention - MICCAI 2016 - 19th International Conference, Athens, Greece, October 17-21, 2016, Proceedings, Part III.

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(2016). Fast Predictive Image Registration. Deep Learning and Data Labeling for Medical Applications - First International Workshop, LABELS 2016, and Second International Workshop, DLMIA 2016, Held in Conjunction with MICCAI 2016, Athens, Greece, October 21, 2016, Proceedings.

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(2015). Uncertainty Quantification for LDDMM Using a Low-Rank Hessian Approximation. Medical Image Computing and Computer-Assisted Intervention - MICCAI 2015 - 18th International Conference Munich, Germany, October 5-9, 2015, Proceedings, Part II.

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(2015). Surface Registration in the Presence of Missing Patches and Topology Change. Medical Image Understanding and Analysis - MIUA 2015. 19th Annual Conference, University of Lincoln, Lincoln, UK, July 15-17, 2015.

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(2015). Statistical Topological Data Analysis - A Kernel Perspective. Advances in Neural Information Processing Systems 28: Annual Conference on Neural Information Processing Systems 2015, December 7-12, 2015, Montreal, Quebec, Canada.

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(2015). Splines for diffeomorphisms. Medical Image Anal..

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(2015). Shape analysis based on depth-ordering. Medical Image Anal..

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(2015). Semi-coupled dictionary learning for deformation prediction. 12th IEEE International Symposium on Biomedical Imaging, ISBI 2015, Brooklyn, NY, USA, April 16-19, 2015.

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(2015). Scene Parsing with Object Instance Inference Using Regions and Per-exemplar Detectors. Int. J. Comput. Vis..

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(2015). Robust estimation of group-wise cortical correspondence with an application to macaque and human neuroimaging studies. Frontiers in Neuroscience.

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(2015). Quantitative assessment of the upper airway in infants and children with subglottic stenosis. The Laryngoscope.

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(2015). Model Criticism for Regression on the Grassmannian. Medical Image Computing and Computer-Assisted Intervention - MICCAI 2015 - 18th International Conference Munich, Germany, October 5 - 9, 2015, Proceedings, Part III.

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(2015). Low-rank atlas image analyses in the presence of pathologies. IEEE transactions on medical imaging.

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(2015). Hierarchical task-driven feature learning for tumor histology. 12th IEEE International Symposium on Biomedical Imaging, ISBI 2015, Brooklyn, NY, USA, April 16-19, 2015.

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(2015). Group Testing for Longitudinal Data. Information Processing in Medical Imaging - 24th International Conference, IPMI 2015, Sabhal Mor Ostaig, Isle of Skye, UK, June 28 - July 3, 2015, Proceedings.

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(2015). Diseased Region Detection of Longitudinal Knee Magnetic Resonance Imaging Data. IEEE Trans. Medical Imaging.

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(2015). Appearance normalization of histology slides. Comput. Medical Imaging Graph..

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(2014). Topological Descriptors of Histology Images. Machine Learning in Medical Imaging - 5th International Workshop, MLMI 2014, Held in Conjunction with MICCAI 2014, Boston, MA, USA, September 14, 2014. Proceedings.

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(2014). Time-Warped Geodesic Regression. Medical Image Computing and Computer-Assisted Intervention - MICCAI 2014 - 17th International Conference, Boston, MA, USA, September 14-18, 2014, Proceedings, Part II.

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(2014). Statistical atlas construction via weighted functional boxplots. Medical Image Anal..

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(2014). Splines for Diffeomorphic Image Regression. Medical Image Computing and Computer-Assisted Intervention - MICCAI 2014 - 17th International Conference, Boston, MA, USA, September 14-18, 2014, Proceedings, Part II.

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(2014). Scene Parsing with Object Instances and Occlusion Ordering. 2014 IEEE Conference on Computer Vision and Pattern Recognition, CVPR 2014, Columbus, OH, USA, June 23-28, 2014.

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(2014). Probabilistic Diffeomorphic Registration: Representing Uncertainty. Biomedical Image Registration - 6th International Workshop, WBIR 2014, London, UK, July 7-8, 2014. Proceedings.

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(2014). PORTR: Pre-Operative and Post-Recurrence Brain Tumor Registration. IEEE Trans. Medical Imaging.

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(2014). Multi-modal registration for correlative microscopy using image analogies. Medical Image Anal..

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(2014). Low-Rank to the Rescue - Atlas-Based Analyses in the Presence of Pathologies. Medical Image Computing and Computer-Assisted Intervention - MICCAI 2014 - 17th International Conference, Boston, MA, USA, September 14-18, 2014, Proceedings, Part III.

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(2014). Large deformation diffeomorphic registration of diffusion-weighted imaging data. Medical Image Anal..

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(2014). Geometric-Feature-Based Spectral Graph Matching in Pharyngeal Surface Registration. Medical Image Computing and Computer-Assisted Intervention - MICCAI 2014 - 17th International Conference, Boston, MA, USA, September 14-18, 2014, Proceedings, Part I.

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(2014). Geodesic Regression on the Grassmannian. Computer Vision - ECCV 2014 - 13th European Conference, Zurich, Switzerland, September 6-12, 2014, Proceedings, Part II.

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(2014). Depth-Based Shape-Analysis. Medical Image Computing and Computer-Assisted Intervention - MICCAI 2014 - 17th International Conference, Boston, MA, USA, September 14-18, 2014, Proceedings, Part III.

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(2014). Automatic atlas-based three-label cartilage segmentation from MR knee images. Medical Image Anal..

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(2013). Weighted Functional Boxplot with Application to Statistical Atlas Construction. Medical Image Computing and Computer-Assisted Intervention - MICCAI 2013 - 16th International Conference, Nagoya, Japan, September 22-26, 2013, Proceedings, Part III.

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(2013). Studying Cerebral Vasculature Using Structure Proximity and Graph Kernels. Medical Image Computing and Computer-Assisted Intervention - MICCAI 2013 - 16th International Conference, Nagoya, Japan, September 22-26, 2013, Proceedings, Part II.

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(2013). Sparse Scale-Space Decomposition of Volume Changes in Deformations Fields. Medical Image Computing and Computer-Assisted Intervention - MICCAI 2013 - 16th International Conference, Nagoya, Japan, September 22-26, 2013, Proceedings, Part II.

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(2013). Segmentation with area constraints. Medical Image Anal..

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(2013). Robust Multimodal Dictionary Learning. Medical Image Computing and Computer-Assisted Intervention - MICCAI 2013 - 16th International Conference, Nagoya, Japan, September 22-26, 2013, Proceedings, Part I.

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(2013). Riemannian metrics for statistics on shapes: parallel transport and scale invariance. Proceedings of the 4th MICCAI workshop on Mathematical Foundations of Computational Anatomy (MFCA).

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(2013). Longitudinal three-label segmentation of knee cartilage. 10th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2013, 7-11 April, 2013, San Francisco, CA, USA, Proceedings.

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(2013). Longitudinal Image Registration With Temporally-Dependent Image Similarity Measure. IEEE Trans. Medical Imaging.

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(2013). Large Deformation Image Classification Using Generalized Locality-Constrained Linear Coding. Medical Image Computing and Computer-Assisted Intervention - MICCAI 2013 - 16th International Conference, Nagoya, Japan, September 22-26, 2013, Proceedings, Part I.

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(2013). Large Deformation Diffeomorphic Registration of Diffusion-Weighted Images with Explicit Orientation Optimization. Medical Image Computing and Computer-Assisted Intervention - MICCAI 2013 - 16th International Conference, Nagoya, Japan, September 22-26, 2013, Proceedings, Part II.

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(2013). Group-Wise Cortical Correspondence via Sulcal Curve-Constrained Entropy Minimization. Information Processing in Medical Imaging - 23rd International Conference, IPMI 2013, Asilomar, CA, USA, June 28-July 3, 2013. Proceedings.

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(2013). Diseased Region Detection of Longitudinal Knee MRI Data. Information Processing in Medical Imaging - 23rd International Conference, IPMI 2013, Asilomar, CA, USA, June 28-July 3, 2013. Proceedings.

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(2013). Diffusion Propagator Estimation Using Radial Basis Functions. Computational Diffusion MRI and Brain Connectivity, MICCAI Workshops CDMRI/MMBC, Nagoya, Japan, September 22nd, 2013.

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(2013). Cortical correspondence via sulcal curve-constrained spherical registration with application to Macaque studies. Medical Imaging 2013: Image Processing, Lake Buena Vista (Orlando Area), Florida, USA, February 10-12, 2013.

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(2013). A pediatric airway atlas and its application in subglottic stenosis. 10th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2013, 7-11 April, 2013, San Francisco, CA, USA, Proceedings.

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(2013). A new tool improves diagnostic test performance for transmission EM evaluation of axonemal dynein arms.. Ultrastructural Pathology.

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(2013). A Locally Adaptive Regularization Based on Anisotropic Diffusion for Deformable Image Registration of Sliding Organs. IEEE Trans. Medical Imaging.

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(2012). Temporally-Dependent Image Similarity Measure for Longitudinal Analysis. Biomedical Image Registration - 5th International Workshop, WBIR 2012, Nashville, TN, USA, July 7-8, 2012. Proceedings.

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(2012). Simulation-Based Joint Estimation of Body Deformation and Elasticity Parameters for Medical Image Analysis. IEEE Trans. Medical Imaging.

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(2012). Simple Geodesic Regression for Image Time-Series. Biomedical Image Registration - 5th International Workshop, WBIR 2012, Nashville, TN, USA, July 7-8, 2012. Proceedings.

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(2012). Registration for Correlative Microscopy Using Image Analogies. Biomedical Image Registration - 5th International Workshop, WBIR 2012, Nashville, TN, USA, July 7-8, 2012. Proceedings.

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(2012). Metamorphic Geodesic Regression. Medical Image Computing and Computer-Assisted Intervention - MICCAI 2012 - 15th International Conference, Nice, France, October 1-5, 2012, Proceedings, Part III.

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(2012). LQG-obstacles: Feedback control with collision avoidance for mobile robots with motion and sensing uncertainty. IEEE International Conference on Robotics and Automation, ICRA 2012, 14-18 May, 2012, St. Paul, Minnesota, USA.

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(2012). Longitudinal Image Registration with Non-uniform Appearance Change. Medical Image Computing and Computer-Assisted Intervention - MICCAI 2012 - 15th International Conference, Nice, France, October 1-5, 2012, Proceedings, Part III.

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(2012). Large Deformation Diffeomorphic Registration of Diffusion-Weighted Images. Medical Image Computing and Computer-Assisted Intervention - MICCAI 2012 - 15th International Conference, Nice, France, October 1-5, 2012, Proceedings, Part II.

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(2012). Image and Statistical Analysis of Melanocytic Histology. Histopathology.

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(2012). Automatic multi-atlas-based cartilage segmentation from knee MR images. 9th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2012, May 2-5, 2012, Barcelona, Spain, Proceedings.

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(2012). Automatic atlas-based three-label cartilage segmentation from MR knee images. 2012 IEEE Workshop on Mathematical Methods in Biomedical Image Analysis, MMBIA 2012, Breckenridge, CO, USA, January 9-10, 2012.

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(2011). The power of correlative microscopy: multi-modal, multi-scale, multi-dimensional. Current Opinion in Structural Biology.

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(2011). Sliding Geometries in Deformable Image Registration. Abdominal Imaging. Computational and Clinical Applications - Third International Workshop, Held in Conjunction with MICCAI 2011, Toronto, ON, Canada, September 18, 2011, Revised Selected Papers.

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(2011). Shape analysis of the neostriatum in subtypes of frontotemporal lobar degeneration: neuroanatomically significant regional morphologic change. Psychiatry Research - Neuroimaging.

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(2011). Shape alterations in the striatum in chorea-acanthocytosis. Psychiatry Research: NeuroImaging.

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(2011). Group-wise automatic mesh-based analysis of cortical thickness. Medical Imaging 2011: Image Processing, Lake Buena Vista, Florida, USA, February 14-16, 2011.

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(2011). Geometric Metamorphosis. Medical Image Computing and Computer-Assisted Intervention - MICCAI 2011 - 14th International Conference, Toronto, Canada, September 18-22, 2011, Proceedings, Part II.

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(2011). Geodesic Regression for Image Time-Series. Medical Image Computing and Computer-Assisted Intervention - MICCAI 2011 - 14th International Conference, Toronto, Canada, September 18-22, 2011, Proceedings, Part II.

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(2011). Deformable image registration of sliding organs using anisotropic diffusive regularization. Proceedings of the 8th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2011, March 30 - April 2, 2011, Chicago, Illinois, USA.

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(2011). Automatic cortical thickness analysis on rodent brain. Medical Imaging 2011: Image Processing, Lake Buena Vista, Florida, USA, February 14-16, 2011.

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(2011). An Optimal Control Approach for Texture Metamorphosis. Comput. Graph. Forum.

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(2011). An automated pipeline for cortical surface generation and registration of the cerebral cortex. Medical Imaging 2011: Image Processing, Lake Buena Vista, Florida, USA, February 14-16, 2011.

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(2010). User-driven 3D mesh region targeting. Medical Imaging 2010: Visualization, Image-Guided Procedures, and Modeling, San Diego, California, United States, 13-18 February 2010.

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(2010). Robust model-based transformation and averaging of diffusion weighted images - applied to diffusion weighted atlas construction. MICCAI, International Workshop on Computational Diffusion MRI (CDMRI10).

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(2010). Prediction-driven Respiratory Motion Atlas Formation for 4D Image-guided Radiation Therapy in Lung. MICCAI, International Workshop on Pulmonary Image Analysis.

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(2010). Physically-based deformable image registration with material property and boundary condition estimation. Proceedings of the 2010 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Rotterdam, The Netherlands, 14-17 April, 2010.

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(2010). DTI Longitudinal Atlas Construction as an Average of Growth Models. MICCAI, International Workshop on Spatio-Temporal Image Analysis for Longitudinal and Time-Series Image Data.

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(2010). DTI Connectivity by Segmentation. Medical Imaging and Augmented Reality - 5th International Workshop, MIAR 2010, Beijing, China, September 19-20, 2010. Proceedings.

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(2010). Automatic three-label bone segmentation from knee MR images. Proceedings of the 2010 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Rotterdam, The Netherlands, 14-17 April, 2010.

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(2010). Automatic bone segmentation and alignment from MR knee images. Medical Imaging 2010: Image Processing, San Diego, California, USA, February 14-16, 2010.

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(2010). Attenuation Analysis of Lamb Waves Using the Chirplet Transform. EURASIP J. Adv. Signal Process..

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(2010). Appearance Normalization of Histology Slides. Machine Learning in Medical Imaging, First International Workshop, MLMI 2010, Held in Conjunction with MICCAI 2010, Beijing, China, September 20, 2010. Proceedings.

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(2009). Shape abnormalities of caudate nucleus in schizotypal personality disorder.. Schizophrenia research.

(2009). Calcium and cyclic nucleotides affect TNF-alpha-induced stem cell migration.. Biochemical and biophysical research communications.

(2009). Quantitative examination of a novel clustering method using magnetic resonance diffusion tensor tractography. NeuroImage.

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(2009). Near-tubular fiber bundle segmentation for diffusion weighted imaging: Segmentation through frame reorientation. NeuroImage.

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(2009). Multidimensional classification of hippocampal shape features discriminates Alzheimer's disease and mild cognitive impairment from normal aging. NeuroImage.

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(2009). Laplace-Beltrami eigenvalues and topological features of eigenfunctions for statistical shape analysis. Comput. Aided Des..

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(2009). Globally Optimal Finsler Active Contours. Pattern Recognition, 31st DAGM Symposium, Jena, Germany, September 9-11, 2009. Proceedings.

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(2009). Cortical Correspondence with Probabilistic Fiber Connectivity. Information Processing in Medical Imaging, 21st International Conference, IPMI 2009, Williamsburg, VA, USA, July 5-10, 2009. Proceedings.

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(2009). Continuous maximal flows and Wulff shapes: Application to MRFs. 2009 IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR 2009), 20-25 June 2009, Miami, Florida, USA.

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(2009). An optimal control approach for the registration of image time-series. Proceedings of the 48th IEEE Conference on Decision and Control, CDC 2009, combined withe the 28th Chinese Control Conference, December 16-18, 2009, Shanghai, China.

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(2009). An optimal control approach for deformable registration. IEEE Conference on Computer Vision and Pattern Recognition, CVPR Workshops 2009, Miami, FL, USA, 20-25 June, 2009.

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(2009). A Method for Normalizing Histology Slides for Quantitative Analysis. Proceedings of the 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Boston, MA, USA, June 28 - July 1, 2009.

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(2008). Tubular Surface Evolution for Segmentation of the Cingulum Bundle from DW-MRI. Foundations of Computational Anatomy Workshop, MICCAI.

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(2008). Tubular Fiber Bundle Segmentation for Diffusion Weighted Imaging. Diffusion Weighted Imaging Workshop, MICCAI.

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(2008). SPHARM detects hippocampal subfield pathology in temporal lobe epilepsy. Proceedings of the ISMRM.

(2008). Segmenting images analytically in shape space. Medical Imaging 2008: Image Processing, San Diego, California, United States, 16-21 February 2008.

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(2008). Restoration of DWI Data Using a Rician LMMSE Estimator. IEEE Trans. Medical Imaging.

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(2008). Knowledge-Based Segmentation for Tracking Through Deep Turbulence. IEEE Trans. Control. Syst. Technol..

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(2008). Geometric Observers for Dynamically Evolving Curves. IEEE Trans. Pattern Anal. Mach. Intell..

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(2008). Fast Global Labeling for Real-Time Stereo Using Multiple Plane Sweeps. Proceedings of the Vision, Modeling, and Visualization Conference 2008, VMV 2008, Konstanz, Germany, October 8-10, 2008.

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(2007). Statistical Shape Analysis of Brain Structures Using Spherical Wavelets. Proceedings of the 2007 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Washington, DC, USA, April 12-16, 2007.

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(2007). Outlier Rejection for Diffusion Weighted Imaging. Medical Image Computing and Computer-Assisted Intervention - MICCAI 2007, 10th International Conference, Brisbane, Australia, October 29 - November 2, 2007, Proceedings, Part I.

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(2007). Locally-Constrained Region-Based Methods for DW-MRI Segmentation. IEEE 11th International Conference on Computer Vision, ICCV 2007, Rio de Janeiro, Brazil, October 14-20, 2007.

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(2007). Global Medical Shape Analysis Using the Volumetric Laplace Spectrum. 2007 International Conference on Cyberworlds, CW 2007, Hannover, Germany, October 24-26, 2007.

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(2007). Global Medical Shape Analysis Using the Laplace-Beltrami Spectrum. Medical Image Computing and Computer-Assisted Intervention - MICCAI 2007, 10th International Conference, Brisbane, Australia, October 29 - November 2, 2007, Proceedings, Part I.

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(2007). Geodesic-Loxodromes for Diffusion Tensor Interpolation and Difference Measurement. Medical Image Computing and Computer-Assisted Intervention - MICCAI 2007, 10th International Conference, Brisbane, Australia, October 29 - November 2, 2007, Proceedings, Part I.

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(2007). Finsler Tractography for White Matter Connectivity Analysis of the Cingulum Bundle. Medical Image Computing and Computer-Assisted Intervention - MICCAI 2007, 10th International Conference, Brisbane, Australia, October 29 - November 2, 2007, Proceedings, Part I.

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(2007). Finsler Level Set Segmentation for Imagery in Oriented Domains. Proceedings of the British Machine Vision Conference 2007, University of Warwick, UK, September 10-13, 2007.

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(2007). A variational segmentation framework using active contours and thresholding. Signal and Image Processing (SIP 2007), Proceedings of the IASTED International Conference, August 20-22, 2007, Honolulu, HI, USA.

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(2007). A Variational Framework Combining Level-sets and Thresholding. Proceedings of the British Machine Vision Conference 2007, University of Warwick, UK, September 10-13, 2007.

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(2006). Model-based analysis of dispersion curves using chirplets. The Journal of the Acoustical Society of America.

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(2006). On the detection of simple points in higher dimensions using cubical homology. IEEE Trans. Image Process..

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(2006). On Diffusion Tensor Estimation. Proceedings of the International Engineering in Medicine and Biology Conference (EMBC).

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(2006). Lamb Wave Characterization by Differential Reassignment and Nonlinear Anisotropic Diffusion. NDT & E International.

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(2006). Fiber Bundle Estimation and Parameterization. Medical Image Computing and Computer-Assisted Intervention - MICCAI 2006, 9th International Conference, Copenhagen, Denmark, October 1-6, 2006, Proceedings, Part II.

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(2006). Dynamic active contours for visual tracking. IEEE Trans. Autom. Control..

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(2006). A Laplace equation approach for shape comparison. Medical Imaging 2006: Visualization, Image-Guided Procedures, and Display, San Diego, California, United States, 11-16 February 2006.

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(2005). On the Evolution of Vector Distance Functions of Closed Curves. Int. J. Comput. Vis..

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(2005). Geometric Observers for Dynamically Evolving Curves. Proceedings of the Conference on Decision and Control.

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(2005). Closed Loop Visual Tracking Using Observer-Based Dynamic Active Contours. Proceedings of the Conference on Guidance Navigation and Control.

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(2004). Dynamic Level Sets for Visual Tracking.

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(2004). Dynamic Geodesic Snakes for Visual Tracking. 2004 IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR 2004), with CD-ROM, 27 June - 2 July 2004, Washington, DC, USA.

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(2004). Area-Based Medial Axis of Planar Curves. Int. J. Comput. Vis..

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(2004). Active Contours and Optical Flow for Automatic Tracking of Flying Vehicles. Proceedings of the American Control Conference.

(2003). Localization of notches with Lamb waves. The Journal of the Acoustical Society of America.

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(2003). Dynamic level sets for visual tracking. Proceedings of the Conference on Decision and Control.

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(2003). Color histogram equalization through mesh deformation. Proceedings of the 2003 International Conference on Image Processing, ICIP 2003, Barcelona, Catalonia, Spain, September 14-18, 2003.

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(2003). A stokes flow boundary integral measurement of tubular structure cross sections in two dimensions. Proceedings of the 2003 International Conference on Image Processing, ICIP 2003, Barcelona, Catalonia, Spain, September 14-18, 2003.

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(2002). Analysis of blood vessel topology by cubical homology. Proceedings of the 2002 International Conference on Image Processing, ICIP 2002, Rochester, New York, USA, September 22-25, 2002.

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(2001). Time-frequency representations of Lamb waves. Journal of the Acoustical Society of America.

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(2001). Parameter and derivative estimation for nonlinear continuous-time system identification. Proceedings of the 5 th IFAC Symposium on Nonlinear Systems, (NOLCOS 01).

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(2001). Crack characterization using guided circumferential waves. Journal of the Acoustical Society of America.

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(2001). Automated methodology to locate notches with Lamb waves. Acoustic Research Letters Online.

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(2000). Time-frequency representation of Lamb waves using the reassigned spectrogram. Acoustic Research Letters Online.

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